Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.500 AlteredExpression disease BEFREE Taken together, our results uncovered a mechanistic insight of a noncoding functional variant acting as an allele-specific distal enhancer to directly modulate IRF5 expression, which might obligate in understanding of complex genetic architectures of SLE and SSc pathogenesis. 31421124 2020
Entrez Id: 919
Gene Symbol: CD247
CD247
0.460 AlteredExpression disease BEFREE We demonstrated that protein expression of the TCR zeta chain was significantly decreased in peripheral T cells from patients with SLE compared to normal controls and patients with systemic sclerosis (SSc). 9701029 1998
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE We recently reported a significant correlation between CTGF mRNA expression and histologic sclerosis in systemic sclerosis. 8618012 1996
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Importantly, the inhibitory and stimulatory effects of rapamycin on the mRNA levels of COL1A2 and MMP1 genes, respectively, were significantly greater in SSc dermal fibroblasts than in normal dermal fibroblasts. 24630239 2014
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE We also examined the effects of COA-Cl on CTGF expression in a mouse SSc model of angiotensin II (Ang II)-induced skin fibrosis. 30954335 2019
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE HGF did not change the protein expression of type I procollagen in the medium of normal human fibroblasts, whereas it reduced the expression in scleroderma fibroblasts. 15675950 2005
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE However, mutation of the previously termed TGFbetaRE reduces ccn2 (ctgf) promoter activity in scleroderma fibroblasts to that seen in normal fibroblasts. 11376132 2001
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Analysis of the expression of COL1A2 promoter deletion constructs indicates that the TGF beta responsive element functional in normal fibroblasts and the sequence involved in intrinsic upregulation of COL1A2 gene expression in scleroderma fibroblasts are both located between bp-376 (Bgl II) and bp-108 (Sma I) sites. 1520334 1992
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE We further found that the expression of TGF-β1, CTGF and type I and type III collagen mRNA was inhibited by MK886 in scleroderma fibroblasts. 21352343 2011
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Here, we investigated the role of phosphatidylinositol 3-kinase (PI3K) in the COL1A2 gene expression in normal and scleroderma fibroblasts. 15153536 2004
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Here, we demonstrate for the first time that CS and CSf exert an inhibitory effect on type I collagen protein synthesis and decrease the corresponding mRNA steady-state levels of COL1A1 and COL1A2 in NF and SF. 18298657 2008
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE CI secretion and steady-state pro alpha1(I) collagen messenger RNA (mRNA) levels and COL1A2 gene activation were examined in fibroblasts grown from lung biopsy specimens obtained from 16 scleroderma patients with lung fibrosis and from 10 histologically normal lung specimens (controls). 9214423 1997
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE We have investigated the role of hc-Krox transcription factor on type I collagen expression by human dermal fibroblasts. hc-Krox exerted a stimulating effect on type I collagen protein synthesis and enhanced the corresponding mRNA steady-state levels of COL1A1 and COL1A2 in foreskin fibroblasts (FF), adult normal fibroblasts (ANF), and scleroderma fibroblasts (SF). 17698844 2007
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE By sampling dermal interstitial fluid using a suction blister device, we show that CTGF levels are greatly elevated in the dermis of scleroderma patients compared with healthy controls and that Iloprost infusion causes a marked decrease in dermal CTGF levels. 11457877 2001
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE Connective tissue growth factor (CCN2) gene expression was significantly reduced and matrix metalloproteinase 1 (MMP1) levels were enhanced after ciprofloxacin treatment to a similar extent in healthy and SSc fibroblasts. 23041765 2012
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE However, neither Smad2 nor Smad4 caused significant effects in COL1A2 promoter activity in normal fibroblasts or SSc fibroblasts. 16319104 2006
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE In conclusion, this study has revealed an important role of cav-1 in mediating TGFβ/Smad1 signaling and CCN2 gene expression in healthy and SSc dermal fibroblasts. 22277251 2012
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE Studies of mechanisms regulating constitutive expression of CTGF by SSc fibroblasts are currently being undertaken and indicate that a TGF-beta responsive element in the CTGF promoter is involved, although this appears to function independent of the Smad proteins, suggesting that other TGF-beta-regulated pathways may be involved. 11698729 2001
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Our results suggest that γ/δ T cells showed activated phenotype in SSc and suggest that SSc γ/δ T cells may play an important role on fibrotic process by upregulation of COL1A2 mRNA expression in fibroblasts. 23159281 2013
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE Elevated pro alpha 2(I) collagen mRNA levels in cultured scleroderma fibroblasts result from an increased transcription rate of the corresponding gene. 3582658 1987
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE Moreover, IL-17A, not IL-17F, reduced the protein expression of α1(I) collagen and connective tissue growth factor. miR-129-5p, one of the downregulated microRNAs in SSc fibroblasts, increased due to IL-17A and mediated the α1(I) collagen reduction. 22403442 2012
Entrez Id: 1278
Gene Symbol: COL1A2
COL1A2
0.400 AlteredExpression disease BEFREE These include the role of transforming growth factor-beta (TGF-beta) and connective tissue growth factor (CTGF) and their receptors in the fibrotic process in scleroderma and the overview of the transcription factors involved in regulation of the human alpha2 (I) collagen (COL1A2) gene. 11861221 2002
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE High levels of CTGF are also evident in biological fluids from patients with systemic sclerosis. 10942593 2000
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE The pattern of CTGF gene expression and collagen synthesis was similar to that in systemic scleroderma. 10848753 2000
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.400 AlteredExpression disease BEFREE Constitutive connective tissue growth factor expression in scleroderma fibroblasts is dependent on Sp1. 12888575 2003